LocARNA::EdgeEnd Class Reference

end of an alignment edge More...

#include <alignment.hh>

Public Member Functions
	EdgeEnd ()
	construct as invalid end
	EdgeEnd (pos_type end)
	construct as position More...
	EdgeEnd (Gap end)
	construct as gap More...
bool	is_gap () const
	gap test More...
bool	is_pos () const
	is position test More...
Gap	gap () const
	operator pos_type () const

Detailed Description

end of an alignment edge

asserts correct type of an edge end

Constructor & Destructor Documentation

EdgeEnd() [1/2]

LocARNA::EdgeEnd::EdgeEnd ( pos_type  end )

inline

construct as position

Note

used for implicit type cast

EdgeEnd() [2/2]

LocARNA::EdgeEnd::EdgeEnd ( Gap  end )

inline

construct as gap

Note

used for implicit type cast

Member Function Documentation

gap()

Gap LocARNA::EdgeEnd::gap ( ) const

inline

edge end as gap

Returns

gap enum

is_gap()

bool LocARNA::EdgeEnd::is_gap ( ) const

inline

gap test

Returns

whether end is gap

is_pos()

bool LocARNA::EdgeEnd::is_pos ( ) const

inline

is position test

Returns

whether end is position

operator pos_type()

LocARNA::EdgeEnd::operator pos_type ( ) const

inline

edge end as position

Returns

position

Note

allow 0 as sentinel/invalid position

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The documentation for this class was generated from the following file:

• src/LocARNA/alignment.hh