LocARNA-2.0.0
LocARNA::SequenceAnnotation Member List

This is the complete list of members for LocARNA::SequenceAnnotation, including all inherited members.

annotation_string(size_t i) constLocARNA::SequenceAnnotationinline
duplicate_names() const (defined in LocARNA::SequenceAnnotation)LocARNA::SequenceAnnotation
empty() constLocARNA::SequenceAnnotationinline
empty_instance()LocARNA::SequenceAnnotationinlinestatic
is_neutral(const name_t &name)LocARNA::SequenceAnnotationstatic
is_neutral_char(char c)LocARNA::SequenceAnnotationinlinestatic
is_neutral_pos(size_t i) constLocARNA::SequenceAnnotation
length() constLocARNA::SequenceAnnotationinline
name(size_t i) constLocARNA::SequenceAnnotation
name_length() constLocARNA::SequenceAnnotationinline
name_t typedefLocARNA::SequenceAnnotation
push_back_name(const name_t &name)LocARNA::SequenceAnnotation
SequenceAnnotation(size_type name_length=0)LocARNA::SequenceAnnotationinlineexplicit
SequenceAnnotation(const std::string &annotation_string)LocARNA::SequenceAnnotationexplicit
SequenceAnnotation(const std::vector< std::string > &annotation_strings)LocARNA::SequenceAnnotationexplicit
SequenceAnnotation(const AlignmentEdges &edges, const SequenceAnnotation &annotationA, const SequenceAnnotation &annotationB)LocARNA::SequenceAnnotation
single_string(char sep='#') constLocARNA::SequenceAnnotation
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